{
  "sites": [
    {
      "area": "Atmosphere climate",
      "config_path": "atmos_clim.module",
      "wrapper": "src/proteus/atmos_clim/wrapper.py",
      "options": [
        {
          "option": "agni",
          "entry": "src/proteus/atmos_clim/agni.py:run_agni",
          "role": "Radiative-convective solver (Julia)"
        },
        {
          "option": "dummy",
          "entry": "src/proteus/atmos_clim/dummy.py:RunDummyAtm",
          "role": "Grey-body placeholder"
        },
        {
          "option": "janus",
          "entry": "src/proteus/atmos_clim/janus.py:RunJANUS",
          "role": "Convective adiabat profile"
        }
      ],
      "sub_dispatches": []
    },
    {
      "area": "Atmospheric chemistry",
      "config_path": "atmos_chem.module",
      "wrapper": "src/proteus/atmos_chem/wrapper.py",
      "options": [
        {
          "option": "dummy",
          "entry": "src/proteus/atmos_chem/dummy.py:run_dummy_chem",
          "role": "Rainout-only placeholder"
        },
        {
          "option": "vulcan",
          "entry": "src/proteus/atmos_chem/vulcan.py:run_vulcan",
          "role": "Kinetics network (VULCAN)"
        },
        {
          "option": null,
          "entry": null,
          "role": "Chemistry disabled"
        }
      ],
      "sub_dispatches": [
        {
          "switch": "`atmos_chem.when`",
          "entry": "src/proteus/atmos_chem/wrapper.py:run_chemistry",
          "doc": "runs the network 'online' during the loop, 'offline' afterwards, or 'manually'"
        }
      ]
    },
    {
      "area": "Atmospheric escape",
      "config_path": "escape.module",
      "wrapper": "src/proteus/escape/wrapper.py",
      "options": [
        {
          "option": "boreas",
          "entry": "src/proteus/escape/boreas.py:run_boreas",
          "role": "Hydrodynamic escape (BOREAS)"
        },
        {
          "option": "dummy",
          "entry": "src/proteus/escape/wrapper.py:run_dummy",
          "role": "Fixed bulk escape rate"
        },
        {
          "option": "zephyrus",
          "entry": "src/proteus/escape/wrapper.py:run_zephyrus",
          "role": "Energy-limited escape (ZEPHYRUS)"
        },
        {
          "option": null,
          "entry": null,
          "role": "Escape disabled; rates zeroed"
        }
      ],
      "sub_dispatches": []
    },
    {
      "area": "Interior energetics",
      "config_path": "interior_energetics.module",
      "wrapper": "src/proteus/interior_energetics/wrapper.py",
      "options": [
        {
          "option": "aragog",
          "entry": "src/proteus/interior_energetics/aragog.py:AragogRunner",
          "role": "T-P formalism (Python)"
        },
        {
          "option": "boundary",
          "entry": "src/proteus/interior_energetics/boundary.py:BoundaryRunner",
          "role": "Boundary-layer energy balance"
        },
        {
          "option": "dummy",
          "entry": "src/proteus/interior_energetics/dummy.py:run_dummy_int",
          "role": "Prescribed cooling"
        },
        {
          "option": "spider",
          "entry": "src/proteus/interior_energetics/spider.py:RunSPIDER",
          "role": "T-S formalism (C, PETSc)"
        }
      ],
      "sub_dispatches": []
    },
    {
      "area": "Interior structure",
      "config_path": "interior_struct.module",
      "wrapper": "src/proteus/interior_energetics/wrapper.py",
      "options": [
        {
          "option": "dummy",
          "entry": "src/proteus/interior_energetics/wrapper.py:determine_interior_radius_with_dummy",
          "role": "Two-layer analytic structure (interior_struct/dummy.py)"
        },
        {
          "option": "spider",
          "entry": "src/proteus/interior_energetics/wrapper.py:determine_interior_radius",
          "role": "Radius root-find against the energetics module"
        },
        {
          "option": "zalmoxis",
          "entry": "src/proteus/interior_energetics/wrapper.py:determine_interior_radius_with_zalmoxis",
          "role": "Self-consistent EOS structure (interior_struct/zalmoxis.py)"
        },
        {
          "option": null,
          "entry": null,
          "role": "Structure solve disabled"
        }
      ],
      "sub_dispatches": []
    },
    {
      "area": "Orbit and tides",
      "config_path": "orbit.module",
      "wrapper": "src/proteus/orbit/wrapper.py",
      "options": [
        {
          "option": "dummy",
          "entry": "src/proteus/orbit/dummy.py:run_dummy_orbit",
          "role": "Fixed Im(k2) tides"
        },
        {
          "option": "lovepy",
          "entry": "src/proteus/orbit/lovepy.py:run_lovepy",
          "role": "Multi-phase tidal heating (Julia)"
        },
        {
          "option": null,
          "entry": null,
          "role": "Tides disabled; Im(k2) set to zero"
        }
      ],
      "sub_dispatches": [
        {
          "switch": "`orbit.evolve = true`",
          "entry": "src/proteus/orbit/orbit.py:evolve_orbital",
          "doc": "evolves semi-major axis and eccentricity each iteration"
        },
        {
          "switch": "`orbit.satellite = true`",
          "entry": "src/proteus/orbit/satellite.py:update_satellite",
          "doc": "evolves the satellite orbit instead of the planetary one"
        }
      ]
    },
    {
      "area": "Outgassing",
      "config_path": "outgas.module",
      "wrapper": "src/proteus/outgas/wrapper.py",
      "options": [
        {
          "option": "atmodeller",
          "entry": "src/proteus/outgas/atmodeller.py:calc_surface_pressures_atmodeller",
          "role": "Equilibrium chemistry (atmodeller)"
        },
        {
          "option": "calliope",
          "entry": "src/proteus/outgas/calliope.py:calc_surface_pressures",
          "role": "fO2-buffered equilibrium (CALLIOPE)"
        },
        {
          "option": "dummy",
          "entry": "src/proteus/outgas/dummy.py:calc_surface_pressures_dummy",
          "role": "Prescribed pressures"
        }
      ],
      "sub_dispatches": [
        {
          "switch": "`outgas.vapourise = true`",
          "entry": "src/proteus/outgas/lavatmos.py:run_vapourisation",
          "doc": "adds rock-vapour equilibrium (LavAtmos) after the outgassing solve"
        },
        {
          "switch": "`outgas.h2_binodal = true`",
          "entry": "src/proteus/outgas/binodal.py:apply_binodal_h2",
          "doc": "applies the H2-silicate binodal miscibility limit"
        }
      ]
    },
    {
      "area": "Star",
      "config_path": "star.module",
      "wrapper": "src/proteus/star/wrapper.py",
      "options": [
        {
          "option": "dummy",
          "entry": "src/proteus/star/dummy.py:generate_spectrum",
          "role": "Black-body star"
        },
        {
          "option": "mors",
          "entry": "src/proteus/star/wrapper.py:init_star",
          "role": "Stellar evolution via the mors package"
        },
        {
          "option": null,
          "entry": null,
          "role": "No stellar evolution"
        }
      ],
      "sub_dispatches": [
        {
          "switch": "`star.mors.tracks`",
          "entry": "src/proteus/star/wrapper.py:get_new_spectrum",
          "doc": "selects the Spada or Baraffe evolution tracks within MORS"
        }
      ]
    },
    {
      "area": "Observations",
      "config_path": "observe.module",
      "wrapper": "src/proteus/observe/wrapper.py",
      "options": [
        {
          "option": "petitRADTRANS",
          "entry": "src/proteus/observe/petitRADTRANS.py:transit_depth",
          "role": "Synthetic transit and eclipse spectra"
        },
        {
          "option": null,
          "entry": null,
          "role": "Observational synthesis disabled"
        }
      ],
      "sub_dispatches": []
    }
  ]
}